Combating Antibiotic Side Effects?

Well not only have I separated my shoulder
but I got a nasty infection from my GF cat that bit me.
I had to receive two days of intravenous anti biotics and have ten more days of oral antibiotics.
i feel like absolute death is there anything you would recommend to get me through this and
possibly able to train.?

You are going to need to ride it out and finish your course. Then you might want to get some probiotics into your system, since antibiotics can screw up your digestive system.